QUOTE(jcoalson @ Apr 8 2008, 17:15)

flac is generally less cpu intensive than, say, lame, but the disk i/o will be higher.
bcass, what OS are you running? If it's Windows, check in Device Manager -> IDE/ATAPI Controllers -> Primary [and Secondary] IDE Channel to see whether your hard drive has been downgraded from an Ultra ATA mode to "PIO Only" mode. I've had this happen a couple times for very bizarre reasons, and all sorts of strange things happened as a result of it (jumpy mouse pointer, random clicks and pops in audio playback, etc.).